H2N2V1, Main, Exploration, bibRecord, 000130

Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia

Identifieur interne : 000130 ( Main/Exploration ); précédent : 000129; suivant : 000131

Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia

Auteurs : Paul Horwood [Cambodge] ; Srey Viseth Horm [Cambodge] ; Annika Suttie [Cambodge] ; Sopheak Thet [Cambodge] ; Phalla Y [Cambodge] ; Sareth Rith [Cambodge] ; San Sorn [Cambodge] ; Davun Holl [Cambodge] ; Sothyra Tum [Cambodge] ; Sowath Ly [Cambodge] ; Erik Karlsson [Cambodge] ; Arnaud Tarantola [Cambodge] ; Philippe Dussart [Cambodge]

Source :

Emerging Infectious Diseases [ 1080-6040 ] ; 2018-02.

RBID : Hal:pasteur-01739343

Descripteurs français

Wicri :
- geographic : Cambodge.

English descriptors

mix :
- Cambodia, H5N1, H7N9, H9N2, Influenza, Phnom Penh, Takeo, avian, avian influenza virus, carcass wash water, chicken, cloacal, co-circulation, co-infection, duck, live bird markets, oropharyngeal, poultry, southeast Asia, swab, viruses.

Abstract

Longitudinal surveillance of 2 live bird markets in Cambodia revealed year-round, high co-circulation of H5, H7, and H9 influenza viruses. We detected influenza A viruses in 51.3% of ducks and 39.6% of chickens, and co-infections, mainly by H5 and H9 viruses, in 0.8% of ducks and 4.5% of chickens.

Url:

https://hal-pasteur.archives-ouvertes.fr/pasteur-01739343

DOI: 10.3201/eid2402.171360

Affiliations:

Cambodge

Links toward previous steps (curation, corpus...)

to stream Hal, to step Corpus: 000037
to stream Hal, to step Curation: 000037
to stream Hal, to step Checkpoint: 000033
to stream Main, to step Merge: 000130
to stream Main, to step Curation: 000130

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia</title>
<author><name sortKey="Horwood, Paul" sort="Horwood, Paul" uniqKey="Horwood P" first="Paul" last="Horwood">Paul Horwood</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Horm, Srey Viseth" sort="Horm, Srey Viseth" uniqKey="Horm S" first="Srey Viseth" last="Horm">Srey Viseth Horm</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Suttie, Annika" sort="Suttie, Annika" uniqKey="Suttie A" first="Annika" last="Suttie">Annika Suttie</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Thet, Sopheak" sort="Thet, Sopheak" uniqKey="Thet S" first="Sopheak" last="Thet">Sopheak Thet</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Y, Phalla" sort="Y, Phalla" uniqKey="Y P" first="Phalla" last="Y">Phalla Y</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Rith, Sareth" sort="Rith, Sareth" uniqKey="Rith S" first="Sareth" last="Rith">Sareth Rith</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Sorn, San" sort="Sorn, San" uniqKey="Sorn S" first="San" last="Sorn">San Sorn</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-92330" status="OLD">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <addrLine>Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.ifad.org/lrkm/region/pi/kh_423.htm</ref>
          </desc>
          <listRelation>            <relation active="#struct-322802" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-322802" type="direct"><org type="institution" xml:id="struct-322802" status="INCOMING">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Holl, Davun" sort="Holl, Davun" uniqKey="Holl D" first="Davun" last="Holl">Davun Holl</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-92330" status="OLD">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <addrLine>Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.ifad.org/lrkm/region/pi/kh_423.htm</ref>
          </desc>
          <listRelation>            <relation active="#struct-322802" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-322802" type="direct"><org type="institution" xml:id="struct-322802" status="INCOMING">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Tum, Sothyra" sort="Tum, Sothyra" uniqKey="Tum S" first="Sothyra" last="Tum">Sothyra Tum</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-92330" status="OLD">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <addrLine>Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.ifad.org/lrkm/region/pi/kh_423.htm</ref>
          </desc>
          <listRelation>            <relation active="#struct-322802" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-322802" type="direct"><org type="institution" xml:id="struct-322802" status="INCOMING">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Ly, Sowath" sort="Ly, Sowath" uniqKey="Ly S" first="Sowath" last="Ly">Sowath Ly</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Karlsson, Erik" sort="Karlsson, Erik" uniqKey="Karlsson E" first="Erik" last="Karlsson">Erik Karlsson</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Tarantola, Arnaud" sort="Tarantola, Arnaud" uniqKey="Tarantola A" first="Arnaud" last="Tarantola">Arnaud Tarantola</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Dussart, Philippe" sort="Dussart, Philippe" uniqKey="Dussart P" first="Philippe" last="Dussart">Philippe Dussart</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">HAL</idno>
<idno type="RBID">Hal:pasteur-01739343</idno>
<idno type="halId">pasteur-01739343</idno>
<idno type="halUri">https://hal-pasteur.archives-ouvertes.fr/pasteur-01739343</idno>
<idno type="url">https://hal-pasteur.archives-ouvertes.fr/pasteur-01739343</idno>
<idno type="doi">10.3201/eid2402.171360</idno>
<date when="2018-02">2018-02</date>
<idno type="wicri:Area/Hal/Corpus">000037</idno>
<idno type="wicri:Area/Hal/Curation">000037</idno>
<idno type="wicri:Area/Hal/Checkpoint">000033</idno>
<idno type="wicri:explorRef" wicri:stream="Hal" wicri:step="Checkpoint">000033</idno>
<idno type="wicri:doubleKey">1080-6040:2018:Horwood P:co:circulation:of</idno>
<idno type="wicri:Area/Main/Merge">000130</idno>
<idno type="wicri:Area/Main/Curation">000130</idno>
<idno type="wicri:Area/Main/Exploration">000130</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia</title>
<author><name sortKey="Horwood, Paul" sort="Horwood, Paul" uniqKey="Horwood P" first="Paul" last="Horwood">Paul Horwood</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Horm, Srey Viseth" sort="Horm, Srey Viseth" uniqKey="Horm S" first="Srey Viseth" last="Horm">Srey Viseth Horm</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Suttie, Annika" sort="Suttie, Annika" uniqKey="Suttie A" first="Annika" last="Suttie">Annika Suttie</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Thet, Sopheak" sort="Thet, Sopheak" uniqKey="Thet S" first="Sopheak" last="Thet">Sopheak Thet</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Y, Phalla" sort="Y, Phalla" uniqKey="Y P" first="Phalla" last="Y">Phalla Y</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Rith, Sareth" sort="Rith, Sareth" uniqKey="Rith S" first="Sareth" last="Rith">Sareth Rith</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Sorn, San" sort="Sorn, San" uniqKey="Sorn S" first="San" last="Sorn">San Sorn</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-92330" status="OLD">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <addrLine>Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.ifad.org/lrkm/region/pi/kh_423.htm</ref>
          </desc>
          <listRelation>            <relation active="#struct-322802" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-322802" type="direct"><org type="institution" xml:id="struct-322802" status="INCOMING">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Holl, Davun" sort="Holl, Davun" uniqKey="Holl D" first="Davun" last="Holl">Davun Holl</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-92330" status="OLD">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <addrLine>Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.ifad.org/lrkm/region/pi/kh_423.htm</ref>
          </desc>
          <listRelation>            <relation active="#struct-322802" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-322802" type="direct"><org type="institution" xml:id="struct-322802" status="INCOMING">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Tum, Sothyra" sort="Tum, Sothyra" uniqKey="Tum S" first="Sothyra" last="Tum">Sothyra Tum</name>
<affiliation wicri:level="1"><hal:affiliation type="laboratory" xml:id="struct-92330" status="OLD">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <addrLine>Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.ifad.org/lrkm/region/pi/kh_423.htm</ref>
          </desc>
          <listRelation>            <relation active="#struct-322802" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-322802" type="direct"><org type="institution" xml:id="struct-322802" status="INCOMING">          <orgName>National Animal Health and Production Investigation Center</orgName>
          <desc>            <address>              <country key="FR"></country>
            </address>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Ly, Sowath" sort="Ly, Sowath" uniqKey="Ly S" first="Sowath" last="Ly">Sowath Ly</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Karlsson, Erik" sort="Karlsson, Erik" uniqKey="Karlsson E" first="Erik" last="Karlsson">Erik Karlsson</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Tarantola, Arnaud" sort="Tarantola, Arnaud" uniqKey="Tarantola A" first="Arnaud" last="Tarantola">Arnaud Tarantola</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
<author><name sortKey="Dussart, Philippe" sort="Dussart, Philippe" uniqKey="Dussart P" first="Philippe" last="Dussart">Philippe Dussart</name>
<affiliation wicri:level="1"><hal:affiliation type="institution" xml:id="struct-54022" status="VALID">          <orgName>Institut Pasteur du Cambodge</orgName>
          <desc>            <address>              <addrLine>BP 983 - 5 , Boulevard Monivong, Phnom Penh</addrLine>
              <country key="KH"></country>
            </address>
            <ref type="url">http://www.pasteur-kh.org/</ref>
          </desc>
          <listRelation>            <relation active="#struct-301247" type="direct"></relation>
          </listRelation>
        <tutelles><tutelle active="#struct-301247" type="direct"><org type="regroupinstitution" xml:id="struct-301247" status="VALID">          <orgName>Réseau International des Instituts Pasteur</orgName>
          <orgName type="acronym">RIIP</orgName>
          <desc>            <address>              <addrLine>25, rue du Dr Roux 75724 Paris Cedex 15</addrLine>
              <country key="FR"></country>
            </address>
            <ref type="url">https://research.pasteur.fr/ip-network</ref>
          </desc>
        </org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>Cambodge</country>
</affiliation>
</author>
</analytic>
<idno type="DOI">10.3201/eid2402.171360</idno>
<series><title level="j">Emerging Infectious Diseases</title>
<idno type="ISSN">1080-6040</idno>
<imprint><date type="datePub">2018-02</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="mix" xml:lang="en"><term>Cambodia</term>
<term>H5N1</term>
<term>H7N9</term>
<term>H9N2</term>
<term>Influenza</term>
<term>Phnom Penh</term>
<term>Takeo</term>
<term>avian</term>
<term>avian influenza virus</term>
<term>carcass wash water</term>
<term>chicken</term>
<term>cloacal</term>
<term>co-circulation</term>
<term>co-infection</term>
<term>duck</term>
<term>live bird markets</term>
<term>oropharyngeal</term>
<term>poultry</term>
<term>southeast Asia</term>
<term>swab</term>
<term>viruses</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Cambodge</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">              <p>Longitudinal surveillance of 2 live bird markets in Cambodia revealed year-round, high co-circulation of H5, H7, and H9 influenza viruses. We detected influenza A viruses in 51.3% of ducks and 39.6% of chickens, and co-infections, mainly by H5 and H9 viruses, in 0.8% of ducks and 4.5% of chickens.</p>
            </div>
</front>
</TEI>
<affiliations><list><country><li>Cambodge</li>
</country>
</list>
<tree><country name="Cambodge"><noRegion><name sortKey="Horwood, Paul" sort="Horwood, Paul" uniqKey="Horwood P" first="Paul" last="Horwood">Paul Horwood</name>
</noRegion>
<name sortKey="Dussart, Philippe" sort="Dussart, Philippe" uniqKey="Dussart P" first="Philippe" last="Dussart">Philippe Dussart</name>
<name sortKey="Holl, Davun" sort="Holl, Davun" uniqKey="Holl D" first="Davun" last="Holl">Davun Holl</name>
<name sortKey="Horm, Srey Viseth" sort="Horm, Srey Viseth" uniqKey="Horm S" first="Srey Viseth" last="Horm">Srey Viseth Horm</name>
<name sortKey="Karlsson, Erik" sort="Karlsson, Erik" uniqKey="Karlsson E" first="Erik" last="Karlsson">Erik Karlsson</name>
<name sortKey="Ly, Sowath" sort="Ly, Sowath" uniqKey="Ly S" first="Sowath" last="Ly">Sowath Ly</name>
<name sortKey="Rith, Sareth" sort="Rith, Sareth" uniqKey="Rith S" first="Sareth" last="Rith">Sareth Rith</name>
<name sortKey="Sorn, San" sort="Sorn, San" uniqKey="Sorn S" first="San" last="Sorn">San Sorn</name>
<name sortKey="Suttie, Annika" sort="Suttie, Annika" uniqKey="Suttie A" first="Annika" last="Suttie">Annika Suttie</name>
<name sortKey="Tarantola, Arnaud" sort="Tarantola, Arnaud" uniqKey="Tarantola A" first="Arnaud" last="Tarantola">Arnaud Tarantola</name>
<name sortKey="Thet, Sopheak" sort="Thet, Sopheak" uniqKey="Thet S" first="Sopheak" last="Thet">Sopheak Thet</name>
<name sortKey="Tum, Sothyra" sort="Tum, Sothyra" uniqKey="Tum S" first="Sothyra" last="Tum">Sothyra Tum</name>
<name sortKey="Y, Phalla" sort="Y, Phalla" uniqKey="Y P" first="Phalla" last="Y">Phalla Y</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/H2N2V1/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000130 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000130 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    H2N2V1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     Hal:pasteur-01739343
   |texte=   Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia
}}

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 14 19:59:40 2020. Site generation: Thu Mar 25 15:38:26 2021

	Serveur d'exploration H2N2
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration H2N2

Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia

Co-circulation of Influenza A H5, H7, and H9 Viruses and Co-infected Poultry in Live Bird Markets, Cambodia

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri